Research Article |
Corresponding author: Zeeshan A. Mirza ( snakeszeeshan@gmail.com ) Academic editor: Alexander Haas
© 2020 Yatin Kalki, Sachin Gowda, Manu Agnivamshi, Karthik Singh, Harshil Patel, Zeeshan A. Mirza.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Kalki Y, Gowda S, Agnivamshi M, Singh K, Patel H, Mirza ZA (2020) On the taxonomy and systematics of the recently described Lycodon deccanensis Ganesh, Deuti, Punith, Achyuthan, Mallik, Adhikari, Vogel, 2020 (Serpentes, Colubridae) from India. Evolutionary Systematics 4(2): 109-118. https://doi.org/10.3897/evolsyst.4.60570
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Lycodon deccanensis Ganesh, Deuti, Punith, Achyuthan, Mallik, Adhikari, Vogel, 2020 was recently described from the Mysore plateau of Karnataka based solely on morphology but lacking in-depth descriptions and comparisons. A scrutiny of the description reveals that the type series, of two specimens, comprise specimens of two different species along with discrepancies throughout the paper. Surveys conducted near the type locality of the species led to the discovery of additional specimens, which allow us to provide an elaborate description of the species and present data on its phylogenetic relationship with members of the genus and comments on the systematics of Lycodon of India. Results from molecular phylogenetics suggest that Lycodon deccanensis is a member of the L. aulicus clade based on molecular data for mitochondrial cytochrome b gene and shows an un-corrected p-distance (sequence divergence) of 14–17% from other members of the Lycodon aulicus clade.
Cytochrome b, molecular phylogeny, taxonomy, wolf snakes, snake systematics
Snakes of the genus Lycodon Boie, 1826 commonly called ‘wolf snakes’, are small to medium-sized colubrids that are generally nocturnal in nature (
Recent fieldwork conducted near the type locality, yielded additional specimens of Lycodon deccanensis that permit us to report additional details of the species and assess its phylogenetic relationships as per current standards in systematics.
Two specimens were captured by hand and euthanized with Halothane as per the directive outlined by standard euthanasia protocols (
Morphological data for related species were compared with
Lycodon deccanensis is primarily compared to the Lycodon species occurring in India and especially with members of the clade that Lycodon deccanensis belongs to, based on the molecular data. Abbreviations used in the manuscript: Bombay Natural History Society, Mumbai (
Genomic DNA was isolated from the preserved tissues of Lycodon spp. using Qiagen DNAeasy kits following protocols provided by the manufacturer. Sequences were generated for the two specimens of the Lycodon deccanensis, L. striatus from Savandurga, Karnataka and L. flavicollis from Devarayanadurga, Karnataka. A fragment of the mitochondrial cytochrome b (cyt b) gene was amplified. Published primers L14919 & H16064 (
Molecular phylogenetics based on 1111bp of the mitochondrial cytochrome b gene, Lycodon deccanensis was found to be a member of the genus Lycodon and was embedded within the L. aulicus clade. Morphological characters that include 17 DSR, laterally angulate ventral scales, loreal touching internasal and the arched maxilla (
Uncorrected p-distance (sequence divergence) for members of the Lycodon aulicus clade.
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | KC010346 Lycodon aulicus | ||||||||||||||||||
2 | KC010348 Lycodon aulicus | 0.03 | |||||||||||||||||
3 | KC010350 Lycodon aulicus | 0.05 | 0.05 | ||||||||||||||||
4 | KC010355 Lycodon capucinus | 0.05 | 0.05 | 0.03 | |||||||||||||||
5 | KC010356 Lycodon capucinus | 0.05 | 0.05 | 0.02 | 0.04 | ||||||||||||||
6 | KC010359 Lycodon capucinus | 0.03 | 0.00 | 0.05 | 0.05 | 0.05 | |||||||||||||
7 | KC010376 Lycodon effraenis | 0.18 | 0.19 | 0.19 | 0.19 | 0.18 | 0.19 | ||||||||||||
8 | KC010364 Lycodon effraenis | 0.20 | 0.20 | 0.20 | 0.20 | 0.20 | 0.20 | 0.14 | |||||||||||
9 | KC010367 Lycodon jara | 0.17 | 0.15 | 0.16 | 0.17 | 0.16 | 0.15 | 0.21 | 0.19 | ||||||||||
10 | KC010368 Lycodon laoensis | 0.18 | 0.17 | 0.17 | 0.17 | 0.17 | 0.17 | 0.16 | 0.15 | 0.18 | |||||||||
11 | KC010370 Lycodon laoensis | 0.18 | 0.17 | 0.17 | 0.17 | 0.17 | 0.17 | 0.16 | 0.15 | 0.18 | 0.02 | ||||||||
12 | AF471040 Lycodon zawi | 0.15 | 0.14 | 0.14 | 0.14 | 0.14 | 0.14 | 0.18 | 0.19 | 0.17 | 0.17 | 0.17 | |||||||
13 | KC010386 Lycodon zawi | 0.13 | 0.12 | 0.14 | 0.13 | 0.13 | 0.12 | 0.17 | 0.18 | 0.15 | 0.16 | 0.16 | 0.02 | ||||||
14 | HQ735416 Lycodon aulicus | 0.14 | 0.13 | 0.15 | 0.15 | 0.15 | 0.13 | 0.20 | 0.20 | 0.17 | 0.18 | 0.18 | 0.09 | 0.09 | |||||
15 | MW006489 Lycodon striatus | 0.17 | 0.17 | 0.17 | 0.17 | 0.17 | 0.17 | 0.17 | 0.16 | 0.16 | 0.13 | 0.13 | 0.16 | 0.15 | 0.17 | ||||
16 | MW006488 Lycodon flavicollis | 0.12 | 0.11 | 0.11 | 0.12 | 0.11 | 0.11 | 0.19 | 0.19 | 0.17 | 0.17 | 0.16 | 0.12 | 0.11 | 0.08 | 0.15 | |||
17 | MW006486 Lycodon deccanensis | 0.16 | 0.16 | 0.17 | 0.17 | 0.17 | 0.16 | 0.18 | 0.19 | 0.16 | 0.17 | 0.17 | 0.16 | 0.15 | 0.17 | 0.14 | 0.16 | ||
18 | MW006487 Lycodon deccanensis | 0.16 | 0.16 | 0.16 | 0.16 | 0.16 | 0.16 | 0.18 | 0.18 | 0.16 | 0.17 | 0.16 | 0.16 | 0.15 | 0.17 | 0.14 | 0.15 | 0.00 |
Examination of the images of the holotype
adult male, NCBS NRC-AA-0010 collected from Devarayanadurga, Tumkur District, Karnataka, India (13.375778°N, 77.210972°E, elevation 1093 m, datum WGS84) by Yatin Kalki, Sachin Gowda, Manu Agnivamshi, Karthik Singh and Zeeshan A. Mirza on 17 June 2020. Adult female,
(based on recently collected material). A small sized species of the genus Lycodon measuring SVL 300–350 mm, bearing 17 smooth DSR at midbody. Loreal in contact with internasal and preocular not in contact with frontal. Nine supralabials of which 3rd to 5th touch eye. Anal shield undivided. Ventrals 204–214 and subcaudals 66–69. Hemipenis cylindrical, not forked, with long spikes in distal half.
Lycodon deccanensis differs from congeners recorded from India and those bearing 17 DSR from south Asia, in bearing the following different or non-overlapping characters: 17 smooth DSR at midbody (vs. 13 and 15 DSR in L. nympha and L. gracilis respectively, DSR keeled in L. fasciatus (Anderson, 1879), L. gammiei (Blanford, 1878) and L. septentrionalis (Gunther, 1875)), nine supralabials (vs. eight in L. striatus, L. mackinnoni Wall, 1906 and L. fasciatus, 6 or 7 in L. nympha and L. gracilis) ventrals 204–214 (vs. 174–186 in L. anamallensis, 165–183 in L. flavomaculatus, 167–188 in L. jara (Shaw, 1802), 218–237 in L. tiwarii Biswas & Sanyal, 1965, 176–206 in L. travancoricus, 154–195 in L. striatus, 163–187 in L. laoensis Gunther, 1864), anal plate undivided (divided in L. aulicus, L. flavicollis, L. nympha, L. gracilis, L. striatus, L. anamallensis, L. flavomaculatus, L. hypsirhinoides (Theobald, 1868)), a single preocular present (vs. preocular absent in L. subcinctus Boie, 1827), loreal in contact with internasal (vs. not in contact in L. travancoricus and L. zawi Slowinski, Pawar, Win, Thin, Gyi, Oo & Tun, 2001).
(Fig.
Lycodon deccanensis male NCBS NRC-AA-0010, (a) dorsal aspect, (b) ventral aspect. Scale bars: 10 mm.
Head short, measuring 12.3 mm from snout tip to the constriction at neck, comprising 3.39% of total length; high, 3.5 mm, with steeply domed snout in lateral view; upper jaw visible from ventral side. Head distinctly broader (5.9 mm) than neck (3.7 mm). Snout gradually tapering to blunt, rounded tip in dorsal view (Fig.
Lycodon deccanensis male NCBS NRC-AA-0010 showing head, (a) dorsal aspect, (b) ventral aspect, (c) right lateral aspect, (d) left lateral aspect.
Mental short, triangular. Infralabials 10, first really long, II to VI infralabials short and thin, fifth onwards larger (Fig.
Body laterally compressed, ventral surface distinctly flattened. Dorsal scales in 17-17-15 rows. First lateral reduction observed after the 10th ventral is at 70% of the ventrals where third and fourth DSR are involved in reduction from 17 DSR to 15 at ventral 143. Dorsal scales imbricate, regularly arranged, vertebral scales not enlarged. All body scales smooth and glossy, with apical pit. Ventral scales 204 in number excluding three preventrals. Anal shield undivided, slightly larger than last ventral scale. Subcaudals paired, 68 in number. Tail terminates in a sharp, tapering apical spine. Total length 375 mm, tail length 75 mm, tail/total length ratio 0.2. Hemipenis cylindrical, not forked, with long spikes in distal half.
(Figs
Lycodon deccanensis male NCBS NRC-AA-0010 in life showing dorsal patterning and colouration (a), close-up of the head (b). Photo by Zeeshan A. Mirza.
The female
Lycodon deccanensis is currently recorded only from the type locality, Devarayanadurga, Karnataka, India, between elevations of 1000 meters and 1190 meters. Other locality records provided by
A total of six individuals have been found, one on 14 July 2019 and the remaining five between 10 June 2020 and 25 June 2020. All individuals were found between 2000 h and 0200 h, suggesting that the species is nocturnal like other Lycodon spp. Ventral scales with angulate lateral edges assist L. deccanensis in scaling the vertical surfaces of rocks, cliffs and walls. We observed one individual two meters high climbing on a relatively smooth wall and another individual 1.5 meters high that had taken refuge in a crevice in a stone pillar. One individual, which we kept in a container overnight, fed on a Cnemaspis cf. mysoriensis that it was offered. The following species have been observed in the same microhabitat sympatrically with L. deccanensis: Cnemaspis cf. mysoriensis, Hemidactylus frenatus, H. parvimaculatus, H. whitakeri, Uperodon taprobanicus, U. variegatus, Boiga flaviviridis, Lycodon flavicollis, and L. gracilis.
Phylogenetic relationships recovered in the present study are congruent with that of
ML phylogeny of selected members of the genus Lycodon based on 1110 bp of mitochondrial cytochrome be gene reconstructed with IQ-TREE online portal. Numbers at nodes represent ML bootstrap support and BI posterior probability. For a complete tree, check supplementary material. Taxa marked with an ‘*’ were generated in the present study.
The description of Lycodon deccanensis by
Additionally, the recent revision of the L. aulicus group contingent on morphology alone by
Description of a distinct Lycodon deccanensis by
The work was carried out with funds from the Rufford Foundation, Singinawa Conservation Foundation to ZAM and the Department of Science and Technology (DST), New Delhi to HP (INSPIRE Fellowship: IF 130480). We would like to thank the forest department of Karnataka for necessary permits. We also thank WARCO team members Chethan Agni, Surya Tejasvi, Manthan KR, Nischal J, Anil Kumar, Naman Raikar, Manju Honnur, & Raghuram Gowda for assisting with field surveys. ZAM acknowledges Nicolas Vidal (
List of species and their sequence accession numbers used in the study
Data type: molecular data
Explanation note: Accession numbers in bold belong to sequences generated in the present study.
ML phylogeny of selected members of the family Colubriade based on 1110 bp of mitochondrial cytochrome be gene reconstructed with IQ-TREE online portal
Data type: Phylogeny
Explanation note: Numbers at nodes represent ML bootstrap support.
ML phylogeny of selected members of the family Colubriade based on 1110 bp of mitochondrial cytochrome be gene reconstructed with RAXML
Data type: Phylogeny
Explanation note: Numbers at nodes represent ML bootstrap support.
BI phylogeny of selected members of the family Colubriade based on 1110 bp of mitochondrial cytochrome be gene reconstructed with MrBayes
Data type: Phylogeny
Explanation note: Numbers at nodes represent BI posterior probability.
Sequence substitution model used in phylogenetic analysis for cyt b gene
Data type: Sequence substitution model
Images of the holotype of Lycodon deccanensis. Courtesy Rahul Khot (
Data type: JPG Images