Research Article |
Corresponding author: Zeeshan A. Mirza ( snakeszeeshan@gmail.com ) Academic editor: Alexander Haas
© 2021 Zeeshan A. Mirza, Virender Kumar Bhardwaj, Harshil Patel.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Mirza ZA, Bhardwaj VK, Patel H (2021) A new species of snake of the genus Oligodon Boie in Fitzinger, 1826 (Reptilia, Serpentes) from the Western Himalayas. Evolutionary Systematics 5(2): 335-345. https://doi.org/10.3897/evolsyst.5.72564
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A new species of Oligodon Fitzinger, 1826 is described based on specimens collected from Churah Valley of Himachal Pradesh. The new species is related to O. arnensis based on molecular as well as morphological data, however differs from it in several aspects. The new species shows a pairwise sequence divergence of 6–20% from congeners for mitochondrial cytochrome b gene. Lack of pterygoid and palatine teeth of the new species suggests that the diet may largely comprise of eggs. Discovery of the new species is not surprising, as the Western Himalayas has been poorly explored in terms of its herpetofaunal diversity. Considerable genetic divergence in the sampled sequence suggests Oligodon arnensis is a species complex, likely represents multiple species and a revision of the group would be desirable.
Colubridae, cytochrome b, Himachal Pradesh, Kukri snake, taxonomy
The colubrid snake genus Oligodon Boie in Fitzinger, 1826 is represented by 84 species distributed throughout Asia (
The Himalayas is one of the global biodiversity hotspots known for its high degree of endemism (
As part of an ongoing study on the reptiles of Himachal Pradesh, we collected specimens of a species of the genus Oligodon that resembled O. arnensis (Shaw, 1802) based on general appearance and dorsal scales round the body. Oligodon arnensis was described based on
The study was conducted under the permit number WLM/2603 issued by the Forest Department of Himachal Pradesh, Government of India. Two specimens were captured by hand and euthanized with Halothane as per the directive outlined by standard euthanasia protocols (
Morphological data for related species were compared with relevant literature (
The hemipenis of freshly euthanized male paratype were everted by palpation of the organ until it was everted to the maximum extent, after which the organ was separated by making an incision around its circumference at the cloacal region and was immersed in warm water (50 °C) for about 5 minutes to soften the tissue. Then, it was slowly everted using a blunt forceps by gently pushing the organ from the distal to proximal end. After eversion, the organ was inflated with 4% formaldehyde and tied at the base with a thread. Later it was stained in 1% alizarin red solution for one hour. Observations were made using a Leica S8APO stereomicroscope. Descriptions of hemipenial morphology and terminology follow
Genomic DNA was isolated from the preserved tissues of the type specimens and a specimen of Oligodon arnensis from Maharashtra, using Qiagen DNAeasy kits following protocols provided by the manufacturer. A fragment of the mitochondrial cytochrome b (cyt b) gene was amplified. Published primers L14919 & H16064 (
female NCBS NRC-AA-019 from near Thanei Kothi village, Churah Valley, Chamba District, Himachal Pradesh, India (32.835467, 76.119381, elevation 1864 m) collected by Virendar Kumar on 22nd June 2020.
male
The specific epithet refers to the Churah Valley where the new species was collected.
Churah Valley Kukri
A medium sized Oligodon (SVL 275 mm) with 17 dorsal scale rows at midbody. Seven supralabials, 3rd and 4th in contact with the eye. Loreal present. 170–175 ventrals, 46–47 subcaudals. Palatine and pterygoid teeth absent. Dorsal patterns consist of 1–2 dorsal scales wide black bands edged with yellow. Ventral scales white with brown smear along the width of each scale, the smear is darker on the lateral edges forming a blotch on each side. 48 to 54 bands in total on the body. Hemipenis forked and spinose throughout.
Morphologically Oligodon churahensis sp. nov. differs from all South Asian congeners, except O. affinis Günther, 1862, O. arnensis, O. cinereus (Günther, 1864), O. erythrogaster Boulenger, 1907, O. melanozonatus Wall, 1922, O. theobaldi (Günther, 1868), O. travancoricus Beddome, 1877, O. venustus (Jerdon, 1853) and O. woodmasoni (Sclater, 1891), by having 17 dorsal scale rows at midbody. The new species differs from O. affinis in having higher (170–175) number of ventral scales (vs. 128–133), higher (46–47) number of subcaudal scales (vs. 23–36) and loreal present (vs. absent) (
The new species is most similar to O. arnensis in bearing a banded dorsum, 17 mid-dorsal scale rows and in shape of the Hemipenis. However, differs from O. arnensis sensu stricto (see Discussion) in bearing a loreal shield (vs. absent in O. arnensis); palatine and pterygoid teeth absent (vs, present in O. arnensis, Fig.
The specimen is in good condition preserved in a coil with its head resting outside the coil. The specimen bears a single longitudinal incision (spanning over nine ventral scales) (Fig.
Oligodon churahensis sp. nov. holotype female NCBS NRC-AA-019 (a) dorsal view, (b) ventral view. Scale bars: 10 mm.
Head short, measuring 10.1 mm from snout to the posterior tip to the parietal scale, comprising 3.6% of total length; high, 5 mm, with steeply domed snout in lateral view; upper jaw visible from ventral side. Head of the same width as the neck (width 6.8 mm). Snout gradually tapering to blunt, rounded tip in dorsal view (Fig.
Oligodon churahensis sp. nov. holotype female NCBS NRC-AA-019, view of the head, (a) dorsal, (b) ventral, (c) lateral right, (d) lateral left.
Mental short, triangular, wider (1.9) than long (1.2). Infralabials 7, first really long, II to VI infralabials short and thin, fifth onwards larger (Fig.
Body rounded, compressed, ventral surface distinctly flattened. Dorsal scales in 17-17-15 rows. First lateral reduction observed after the 10th ventral is at 50% of the ventrals where third and fourth DSR are involved in reduction from 17 DSR to 16 at ventral 85, thereafter from 16 DSR to 15 at the 90th ventral, row 2 +3 involved (52.9%). Dorsal scales imbricate, regularly arranged, vertebral scales not enlarged. All body scales smooth and glossy, without apical pit. Ventral scales 175 in number excluding two preventrals. Anal shield divided, slightly larger than last ventral scale. Subcaudals paired, 46 in number. Tail terminates in a sharp, tapering apical spine. Total length 335 mm, tail length 60 mm, tail/total length ratio 0.18.
‘In preservative’ Overall in a shade of pale brown with broad dark brown to black bands throughout the body. Each dorsal scale bears dark brown mottling. The first band is thin that runs across the internasals, the second in shape of a chevron that runs from fourth supralabial along the eye on the either side of the head and joins at the prefrontals. The third one, runs from the posterior of the angle of the jaw along the posterior temporals and further along the parietal and meets the frontal. The fourth broad chevron mark (4–5 scales wide) meets at the posterior portion of the parietal. The dorsal broad black bands are 1–2 scale wide edged with cream colour. The bands in the anterior 1/3rd of the SVL are not connected at the vertebral scale row. Each dorsal band is spaced by 3–4 dorsal scales. Forty-five bands on the dorsum from the nape to the vent and nine bands on the tail. Ventral scales white with brown smear along the width of each scale, the smear is darker on the lateral edges forming a blotch on each side.
Skull features: A complete and robust skull typical of members of the family Colubridae (
The hemipenis is fully everted and expanded. The organ is stout, slightly bilobed, and semicapitate; lobes extend to about 20% of the hemipenis. The organ is spinous throughout; the spines are larger near the base and mid body and gradually decreases in size distally; sulcus spermaticus deep, bifurcating on the terminal fifth of the hemipenial body, with centrolineal orientation; the spine line on either side of the sulcus spermaticus is weak; hemipenial base is nude, with few spinnules.
The holotype and the paratype were found actively moving along a mud road around 20:00 hours (Fig.
The paratype male agrees with the description of the female holotype except for differences listed here: V 170 (+2 preventrals) Sc 47, first 8 subcaudals undivided thereafter the 9th subcaudal is divided followed by three undivided subcaudals and the rest are divided (13th onwards). The colouration of the male is much darker in comparison with the holotype. The number of dark bands on the dorsum in the paratype male is 37 bands from nape to the vent and 11 on the tail. Variation in the scale reduction formula is presented in Table
Phylogenetic analysis based on mitochondrial cytochrome b gene recovered two well-supported clades within Oligodon, viz the ‘arnensis’ clade and the ‘albocinctus’ clade. The new species, O. churahensis sp. nov. was found to be a member of the ‘arnensis’ clade, and the clade containing it is sister to O. arnensis (Fig.
Un-corrected pairwise sequence divergence for Oligodon spp. for the mitochondrial cytochrome b gene.
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | DQ902112 Coelognathus helena | ||||||||||||||||||||||||
2 | AF471054 Ptyas mucosa | 0.19 | |||||||||||||||||||||||
3 | MZ675817 Oligodon churahensis sp. nov. | 0.20 | 0.19 | ||||||||||||||||||||||
4 | MZ675818 O. churahensis sp. nov. | 0.20 | 0.19 | 0.00 | |||||||||||||||||||||
5 | MZ675819 O. arnensis Maharashtra | 0.20 | 0.20 | 0.06 | 0.06 | ||||||||||||||||||||
6 | KC347464 O. arnensis | 0.20 | 0.20 | 0.05 | 0.05 | 0.03 | |||||||||||||||||||
7 | MK941834 O. cf. churahensis | 0.19 | 0.19 | 0.03 | 0.03 | 0.06 | 0.05 | ||||||||||||||||||
8 | MN395604 O. rostralis | 0.20 | 0.19 | 0.17 | 0.17 | 0.16 | 0.16 | 0.17 | |||||||||||||||||
9 | MN395603 O. lacroixi | 0.19 | 0.19 | 0.15 | 0.15 | 0.15 | 0.15 | 0.15 | 0.13 | ||||||||||||||||
10 | MN395602 O. annamensis | 0.20 | 0.18 | 0.16 | 0.16 | 0.16 | 0.16 | 0.16 | 0.07 | 0.14 | |||||||||||||||
11 | MN395601 O. annamensis | 0.19 | 0.18 | 0.16 | 0.16 | 0.16 | 0.16 | 0.16 | 0.07 | 0.13 | 0.01 | ||||||||||||||
12 | KF732930 O. chinensis | 0.20 | 0.18 | 0.16 | 0.16 | 0.15 | 0.16 | 0.15 | 0.11 | 0.13 | 0.11 | 0.10 | |||||||||||||
13 | KF732929 O. formosanus | 0.20 | 0.18 | 0.15 | 0.16 | 0.16 | 0.16 | 0.15 | 0.11 | 0.14 | 0.11 | 0.11 | 0.05 | ||||||||||||
14 | MK201516 O. ornatus | 0.20 | 0.19 | 0.15 | 0.15 | 0.15 | 0.15 | 0.14 | 0.14 | 0.08 | 0.12 | 0.12 | 0.11 | 0.12 | |||||||||||
15 | MK201512 O. formosanus | 0.20 | 0.18 | 0.16 | 0.16 | 0.16 | 0.16 | 0.16 | 0.11 | 0.11 | 0.10 | 0.10 | 0.04 | 0.00 | 0.12 | ||||||||||
16 | MK201491 O. fasciolatus | 0.20 | 0.17 | 0.16 | 0.16 | 0.17 | 0.17 | 0.17 | 0.12 | 0.13 | 0.12 | 0.11 | 0.09 | 0.09 | 0.14 | 0.09 | |||||||||
17 | MK201461 O. fasciolatus | 0.20 | 0.17 | 0.16 | 0.16 | 0.17 | 0.17 | 0.17 | 0.12 | 0.13 | 0.11 | 0.11 | 0.09 | 0.08 | 0.14 | 0.09 | 0.00 | ||||||||
18 | MK201386 O. lacroixi | 0.19 | 0.19 | 0.14 | 0.14 | 0.14 | 0.14 | 0.16 | 0.13 | 0.07 | 0.11 | 0.11 | 0.11 | 0.11 | 0.08 | 0.11 | 0.14 | 0.13 | |||||||
19 | MK201568 O. albocinctus | 0.21 | 0.17 | 0.16 | 0.16 | 0.17 | 0.18 | 0.18 | 0.15 | 0.15 | 0.16 | 0.16 | 0.16 | 0.16 | 0.14 | 0.16 | 0.15 | 0.15 | 0.15 | ||||||
20 | MK201481 O. catenatus | 0.19 | 0.19 | 0.15 | 0.15 | 0.15 | 0.15 | 0.16 | 0.13 | 0.00 | 0.12 | 0.12 | 0.11 | 0.11 | 0.08 | 0.11 | 0.13 | 0.13 | 0.07 | 0.15 | |||||
21 | MK201321 O. cinereus | 0.19 | 0.18 | 0.13 | 0.13 | 0.13 | 0.14 | 0.14 | 0.14 | 0.13 | 0.13 | 0.12 | 0.12 | 0.12 | 0.14 | 0.12 | 0.14 | 0.13 | 0.13 | 0.13 | 0.13 | ||||
22 | KC010387 O. maculatus | 0.21 | 0.21 | 0.16 | 0.16 | 0.16 | 0.16 | 0.18 | 0.16 | 0.15 | 0.15 | 0.16 | 0.16 | 0.16 | 0.15 | 0.15 | 0.15 | 0.15 | 0.13 | 0.13 | 0.14 | 0.12 | |||
23 | KC347465 O. sublineatus | 0.20 | 0.19 | 0.18 | 0.18 | 0.17 | 0.18 | 0.18 | 0.18 | 0.15 | 0.17 | 0.17 | 0.17 | 0.17 | 0.18 | 0.17 | 0.18 | 0.18 | 0.17 | 0.16 | 0.15 | 0.16 | 0.18 | ||
24 | KC347478 O. calamarius | 0.20 | 0.21 | 0.17 | 0.17 | 0.17 | 0.17 | 0.18 | 0.19 | 0.16 | 0.17 | 0.18 | 0.18 | 0.18 | 0.16 | 0.17 | 0.17 | 0.16 | 0.15 | 0.17 | 0.14 | 0.16 | 0.17 | 0.13 | |
25 | KC347483 O. taeniolatus | 0.19 | 0.18 | 0.15 | 0.15 | 0.16 | 0.15 | 0.17 | 0.15 | 0.15 | 0.16 | 0.16 | 0.16 | 0.17 | 0.16 | 0.17 | 0.17 | 0.16 | 0.14 | 0.19 | 0.14 | 0.16 | 0.18 | 0.17 | 0.16 |
Maximum Likelihood phylogeny of selected species of the genus Oligodon showing relationships based on partial fragment of mitochondrial cytochrome b gene. Tree generated through bootstrap replicates of 1000 through an ultrafast tree search option. Numbers at nodes represent ML bootstrap support values. Species bearing ‘*’ were generated in the present study.
Species of the genus Oligodon are known to feed on reptile and bird eggs (
Comparison of the new species with Oligodon species bearing 17 DSR from south Asia. Missing data denoted by N.A.
Species | Source | Ventrals | Subcaudals | Anal | Supralabials | Loreal | Hemipenis | Maxillary teeth | Palatine, Ptyregoid teeth | Dorsal Pattern | Ventral Pattern |
---|---|---|---|---|---|---|---|---|---|---|---|
Oligodon churahensi sp. nov. | present study | 170–175 | 46–47 | divided | 7 | present | forked, spinose | 8–10 | absent | 48–54 bands on body | whitish with brown smear |
O. affinis |
|
128–133 | 23–36 | divided | 7 | absent | not forked, spinose | 7 | N.A. | 31–41 bands on body | whitish with rectangular black marking |
O. arnensis |
|
161–202 | 41–59 | divided | 6–8 | absent | forked, spinose | 8–11 | present | ≤40 bands on body | white without any marking |
O. cinereus |
|
157–185 | 29–42 | single | 8 | present | not forked, lack spines | 10–12 | N.A. | variable | variable |
O. erythrogaster |
|
169–186 | 42–59 | divided | 7 | absent | not forked, lack spines | 7–8 | N.A. | stripes | reddish with black spots on the edges |
O. melanozonatus |
|
171–173 | 42–45 | divided | 6 | absent | N.A. | 8 | N.A. | bands | whitish with squarish black spots |
O. theobaldi |
|
164–180 | 30–42 | divided | 8 | present | not forked, lack spines | 15–16 | N.A. | 4 stripes with faint transverse bands | variable |
O. travancoricus |
|
150–155 | 31–39 | divided | 7 | absent | not forked, spinose | 7 | N.A. | 23–27 bands on body | white with black checkered marking |
O. venustus |
|
138–165 | 27–36 | divided | 7 | absent | not forked, spinose | 7–8 | N.A. | bands made up of rhomboid or oval spots | whitish with black quadrilateral spots |
O. woodmasoni |
|
164–190 | 43–57 | single | 6 | present/absent | not forked, lack spines | 8–10 | N.A. | 8 longitudinal stripes | whitish with a brown stripe in the centre and a dark spot on the edges |
Molecular divergence observed for representatives of O. arnensis from Maharashtra and Sri Lanka is 3% for mitochondrial cytochrome b gene (Table
The Western Himalayas was thought to harbour a subset of the Eastern Himalayan biodiversity (
The discovery of the species would not have been possible without Instagram (Facebook, Inc.) where the first author (ZAM) came across image of the new species. The Forest Department of Himachal Pradesh is thanked for necessary permits to conduct research. Rakeshwar Kapoor shared images and locality data for the new species. We would like to acknowledge the help and support of the sequencing, Museum and Field facility and EM facility at NCBS. We would like to thank Raju Vyas, Jakob Hallermann and an anonymous reviewer for their constructive comments from which the manuscript greatly benefitted. Rahul Khot and Saunak Pal at
Figure S1. Plate 35 of Russel (1796)
Data type: multimedia
Figure S2. Plate 38 of Russel (1796)
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Figure S3. Paratype male of Oligodon churahensis sp. nov.
Data type: multimedia